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Academic Journal

AbImmPred: An immunogenicity prediction method for therapeutic antibodies using AntiBERTy-based sequence features.

Authors : Wang, Hong¹ (AUTHOR); Hao, Xiaohu¹ (AUTHOR); He, Yuzhuo¹ (AUTHOR)

Subjects: *IMMUNE response; *MACHINE learning; *WEB servers

Source: PLoS ONE. 2/23/2024, Vol. 19 Issue 2, p1-15. 15p.

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Academic Journal

PhyloString: A web server designed to identify, visualize, and evaluate functional relationships between orthologous protein groups across different phylogenetic lineages.

Authors : Dorantes-Torres, Claudia¹ (AUTHOR); Carrera-Reyna, Maricela¹ (AUTHOR); Santos, Walter¹ (AUTHOR)

Subjects: *WEB servers; *WEB design; *NUCLEIC acids

Source: PLoS ONE. 1/26/2024, Vol. 19 Issue 1, p1-24. 24p.

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Academic Journal

Identification of protein signatures for lung cancer subtypes based on BPSO method.

Authors : Wang, Jihan¹ (AUTHOR); Wang, Hanping^1,2 (AUTHOR); Xu, Jing¹ (AUTHOR)

Subjects: *PROTEOMICS; *LUNG cancer; *PROPORTIONAL hazards models

Source: PLoS ONE. 12/7/2023, Vol. 18 Issue 12, p1-16. 16p.

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Academic Journal

SRplot: A free online platform for data visualization and graphing.

Authors : Tang, Doudou¹ (AUTHOR); Chen, Mingjie² (AUTHOR); Huang, Xinhua³ (AUTHOR)

Subjects: *WEB servers; *DATA visualization; *WEB browsers

Source: PLoS ONE. 11/9/2023, Vol. 18 Issue 11, p1-8. 8p.

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TROLLOPE: A novel sequence-based stacked approach for the accelerated discovery of linear T-cell epitopes of hepatitis C virus.

Authors : Charoenkwan, Phasit¹ (AUTHOR); Waramit, Sajee² (AUTHOR); Chumnanpuen, Pramote^2,3 (AUTHOR)

Subjects: *HEPATITIS C virus; *MACHINE learning; *EPITOPES

Source: PLoS ONE. 8/25/2023, Vol. 18 Issue 8, p1-22. 22p.

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The assessment of molecular dynamics results of three-dimensional RNA aptamer structure prediction.

Authors : Ropii, Bejo¹ (AUTHOR); Bethasari, Maulidwina² (AUTHOR); Anshori, Isa^1,3 (AUTHOR)

Subjects: *APTAMERS; *MOLECULAR dynamics; *RNA

Source: PLoS ONE. 7/27/2023, Vol. 18 Issue 7, p1-12. 12p.

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Academic Journal

DISA tool: Discriminative and informative subspace assessment with categorical and numerical outcomes.

Authors : Alexandre, Leonardo^1,2,3 (AUTHOR) ; Costa, Rafael S.^3,4 (AUTHOR); Henriques, Rui^1,2 (AUTHOR)

Subjects: *PATTERNS (Mathematics); *INTEGRATED software; *PHENOTYPES

Source: PLoS ONE. 10/19/2022, Vol. 17 Issue 10, p1-19. 19p.

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Academic Journal

MiCloud: A unified web platform for comprehensive microbiome data analysis.

Authors : Gu, Won¹ (AUTHOR); Moon, Jeongsup² (AUTHOR); Chisina, Crispen¹ (AUTHOR)

Subjects: *DATA analysis; *HUMAN microbiota; *WEB servers

Source: PLoS ONE. 8/1/2022, Vol. 17 Issue 8, p1-17. 17p.

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Modelling aptamers with nucleic acid mimics (NAM): From sequence to three-dimensional docking.

Authors : Oliveira, Ricardo^1,2 (AUTHOR); Pinho, Eva^1,2 (AUTHOR); Sousa, Ana Luísa¹ (AUTHOR)

Subjects: *APTAMERS; *NUCLEIC acids; *WEB servers

Source: PLoS ONE. 3/23/2022, Vol. 17 Issue 3, p1-14. 14p.

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Academic Journal

miRbiom: Machine-learning on Bayesian causal nets of RBP-miRNA interactions successfully predicts miRNA profiles.

Authors : Pradhan, Upendra Kumar^1,2,3 (AUTHOR); Sharma, Nitesh Kumar^1,2 (AUTHOR); Kumar, Prakash^1,2,3 (AUTHOR)

Subjects: *RNA-binding proteins; *MICRORNA; *GENE expression

Source: PLoS ONE. 10/12/221, Vol. 16 Issue 10, p1-28. 28p.

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